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SARS-CoV-2 Coronavirus (COVID-19)

Discussion in 'Environmental Discussion' started by tochatihu, Jan 26, 2020.

  1. Salamander_King

    Salamander_King Senior Member

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    In principal what you have described for the "antibody test" is the technic of using an antibody to detect the presence of antigen (a substance that binds antibody). But to my knowledge, most of the "antibody test" we have been talking about is a serological test on the human population to detect the presence of antibody (IgG subclass but may include IgM subclass for the early phase of the immune response) against SARS-CoV-2. A distinction needs to be made for those two different antibody tests.

    As for the PCR test, I am pretty sure that none of currently in use RT-PCR for the diagnosis of COVID-19 uses "gel electrophoresis" for the detection of amplified DNA. They now use a platform that is "real-time" so that amplified DNA can be detected in situ in the plate on a PCR machine, mostly using fluorescent dye incorporation.

    Plasmapheresis and using tainted plasma for other human treatment is one sure way to spread the virus. AIDS epidemic in many countries was accelerated precisely by that mode of transmission.
    The AIDS epidemic and commercial plasmapheresis. - PubMed - NCBI
     
    #1401 Salamander_King, Apr 4, 2020
    Last edited: Apr 4, 2020
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  2. bwilson4web

    bwilson4web BMW i3 and Model 3

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    We agree but I we're getting pleas for blood donation and their only COVID-19 claim is 'you won't catch it.' But I throughly agree with your analysis that blood donations from COVID-19 recovered or asymptomatic individuals has a significant risk. Just I don't think they are screening the donors expect from the lame, 20 questions survey.

    Now I suspect that plasma could be treated to kill any virus while preserving the antibodies. My thinking is low or elevated temperature might denature the virus. Going after the plasmid coating might also work without risking the antibodies. But these are my personal speculations.

    Bob Wilson
     
  3. Trollbait

    Trollbait It's a D&D thing

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    The one that comes to mind is to avoid those that could have metal or plastic directly supporting the filter media just to have easier time cutting.

    Thanks. My description came from what I worked with in the lab years ago.
     
  4. Salamander_King

    Salamander_King Senior Member

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    The temperature that would denature virus would effectively denature antibody or immunoglobulin which are made of mostly protein moiety. There are other effective means of isolating and purifying immunoglobulin from plasma. But I just can not see FDA would ever approve the use of such antibody collected even purified from actively infected patients to be used for therapy for others.

    I am not an expert on the subject of immunotherapy, but the standard method of producing therapeutic antibodies are using animal, mostly lab or farm animals such as rabbit, chicken, cow, goat, for polyclonal antibodies, or in hybridoma cell culture originating from mice for monoclonal antibodies.

    Note of caution is that even such antibodies can be mass-produced, it's therapeutic use may still be difficult in light of the fact that there exist many challenges and hindrances for the development of effective immunotherapy reagents for other known infectious disease.
    Therapeutic antibodies for infectious diseases
     
  5. Trollbait

    Trollbait It's a D&D thing

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    The plasma that is being collected used is coming from recovered patients. There is still risk of live virus still being present in their blood, but presumably, the plasma is being given to those already with a high virus load; the sick.
     
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  6. Mark57

    Mark57 2021 Tesla Model 3 LR AWD

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    Regarding Covid-19 research. For those of you that may not fully understand what's being done with all the thousands of people contributing their spare computer time to Folding@Home and the Rosetta@home projects, here is an April 3rd article that shows and explains some of the progress made recently. There is hope.

    Capturing the Covid-19 Demogorgon (aka Spike) in action
     
  7. tochatihu

    tochatihu Senior Member

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    "pretty sure that none of currently in use RT-PCR for the diagnosis of COVID-19 uses "gel electrophoresis" @1402

    I'm sure you are correct. pouring gels that do not make smileys is another developed skill, and always takes time.


    "Now I suspect that plasma could be treated to kill any virus while preserving the antibodies" @1403
    Stop suspecting that.
     
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  8. spiderman

    spiderman wretched

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    It's the potential I am guessing. At the moment its just a bad flu season.

    This thing was designed to be nasty fast from what I gather.
     
  9. tochatihu

    tochatihu Senior Member

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    Two example electrophresis gel from internet. Straight and narrow lines in each lane are what we're aiming for. One looks like an xray of the pile left behind after a person walked through an airplane propeller. Or something.

    Electrophoretic gels.png
     
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  10. fuzzy1

    fuzzy1 Senior Member

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    Hospital-wise, it is much worse than a normal bad flu season, with patients needing substantially longer support. Flu shouldn't be stacking patients head-to-toe on the hallway floors.

    Deathrate-wise, a bad flu season should average 500-ish deaths per day in the U.S., less in the smaller countries. A good season, maybe one-third that rate. For Covid-19, not just the U.S., but also smaller Spain, Italy, France, and UK all higher than that now.
     
    #1410 fuzzy1, Apr 4, 2020
    Last edited: Apr 4, 2020
  11. tochatihu

    tochatihu Senior Member

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    IF US escapes with fatalities similar to bad year of seasonal influenza, another difference is that fatalities are very compressed in time and place. Hospitals and mortuary facilities are very stressed in those places.
     
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  12. bisco

    bisco cookie crumbler

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    especially in a few key cities.

    some things we never hear about the flu:

    lack of personal protection equipment

    hospital staff being infected at a high rate

    lack of ventilators and icu space

    closing hospitals to all non essential medical services due to high infection rate

    deaths sweeping through senior residences

    deaths sweeping through families
     
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  13. tochatihu

    tochatihu Senior Member

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    Anyone have info on flu vaccination rates for US folks >70 yrs? My guess is higher than population overall.

    Bisco, unretire and look that up.
     
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  14. Salamander_King

    Salamander_King Senior Member

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    Here it is.
    Estimates of Influenza Vaccination Coverage among Adults—United States, 2017–18 Flu Season | FluVaxView | Seasonal Influenza (Flu) | CDC
    For the 2017-18 season, flu vaccination coverage increased with age, from 26.9% among adults 18-49 years to 59.6% among adults ≥65 years (Figure 2).
    Flu Vaccination Coverage, United States, 2018–19 Influenza Season | FluVaxView | Seasonal Influenza (Flu) | CDC
    Coverage for 2018–19 was higher for every age group compared with the 2017–18 season. As observed each flu season, flu vaccination coverage among adults increased with increasing age.

    Screenshot 2020-04-04 at 10.10.39 PM.png
     
    #1414 Salamander_King, Apr 4, 2020
    Last edited: Apr 4, 2020
  15. fuzzy1

    fuzzy1 Senior Member

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    Our epicentric nursing home had 1/3rd of its residents die from this disease, in 3 weeks. Bad flus don't do that.
     
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  16. tochatihu

    tochatihu Senior Member

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  17. Salamander_King

    Salamander_King Senior Member

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    #1417 Salamander_King, Apr 4, 2020
    Last edited: Apr 4, 2020
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  18. tochatihu

    tochatihu Senior Member

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    I recall a veterinarian office with a cutaway model of dog heart thus infested. It was gross. Presumably provided free by manufacturer to increase sales.
     
  19. SFO

    SFO Senior Member

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    [​IMG]

    Nothing to see here...
     
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  20. fuzzy1

    fuzzy1 Senior Member

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